Code: BIOL-476
Semester: H
Course Type: Elective
ECTS units: 6
Instructor
Associate Professor: Pavlos Pavlidis
Email:
Description
Course contents:
- Introduction to biology needed for bioinformatics analysis. Usual abstractions of biological concepts and mechanisms used in bioinformatics
- General introduction to R programming. The R studio
- Analysis of PWM for detection of Transcription Factor Binding Sites
- GEO, SRA, ArrayExpress and Uniprot Data
- Microarray analysis
- statistical tests, null and alternative hypothesis
- t-test
- Linear Models in gene expression analysis
- Linear models with more than a single variable
- Plots in R
- Analysis of population genetics data